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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
tsv
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
611
liver
507
pancreas
333
epithelium
306
kidney
219
heart
202
connective tissue
175
brain
121
vasculature
115
blood vessel
101
bone element
89
adipose tissue
86
musculature of body
69
blood
69
bodily fluid
57
artery
50
limb
35
eye
24
spleen
23
embryo
19
lung
18
ureter
16
skeleton
1
bone marrow
1
pericardium
1
thymus
1
vein
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
24
AMP-T2D consortium
audit.ERROR.category!
audit script error
files.file_type!
tsv
month_released!
October, 2019
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
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