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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
2
Capture-C
Assay category
25
DNA accessibility
20
Transcription
Date released
40
May, 2022
4
August, 2021
3
February, 2023
Available data
25
bigWig
24
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
Organism
47
Homo sapiens
Biosample type
40
tissue
7
in vitro differentiated cells
Organ
40
liver
4
connective tissue
Project
47
AMP
Genome assembly (visualization)
27
hg19
Lab
3892
AMP-T2D consortium
343
Kyle Gaulton, UCSD
294
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
audit.ERROR.category!
audit script error
files.file_type!
vcf
month_released!
January, 2018
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
total RNA-seq
Capture-C
tissue
liver
20
20
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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