Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
33
single cell RNA-seq
10
ATAC-seq
6
WGBS
Assay category
125
Transcription
10
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
40
September, 2020
18
February, 2021
7
August, 2020
Available data
zippedFastqFolder
142
fastq
10
bigWig
6
tsv
Organism
141
Homo sapiens
Biosample type
141
primary cell
Organ
69
epithelium
69
pancreas
Project
141
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3716
AMP-T2D consortium
343
Kyle Gaulton, UCSD
142
Katalin Susztak, Upenn
141
Klaus Kaestner, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
audit script error
audit.ERROR.category!
audit script error
files.file_type!
zippedFastqFolder
month_released!
March, 2020
May, 2019
BIOSAMPLE
ASSAY
141 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
primary cell
pancreatic alpha cell
42
7
6
exocrine cell
39
Langerhans cell
33
pancreatic beta cell
11
3
Download