Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
19
RRBS
Assay category
64
DNA accessibility
19
DNA methylation
Date released
64
August, 2021
15
July, 2019
4
August, 2017
Available data
3212
bam
bigWig
1688
bed narrowPeak
1523
tsv
1328
fastq
963
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
261
bed bed3+
155
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
7
bed bedgraph
3
csv
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
83
Homo sapiens
Biosample type
73
tissue
10
primary cell
Organ
68
kidney
6
epithelium
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
83
AMP
Genome assembly (visualization)
64
GRCh38
19
hg19
Lab
64
Katalin Susztak, Upenn
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.ERROR.category!
audit script error
files.file_type!
bigWig
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
83 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
RRBS
tissue
kidney
64
1
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
+ See 3 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
See all biosamples
Download