Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
3
single cell RNA-seq
Assay category
7
DNA accessibility
3
Transcription
Date released
5
February, 2021
3
February, 2023
1
November, 2018
1
September, 2018
Available data
3385
bam
3163
bigWig
1811
bed narrowPeak
1591
tsv
1324
fastq
1036
bigBed narrowPeak
391
tagAlign
316
bed broadPeak
285
bigBed broadPeak
272
bed bed3+
154
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
10
Homo sapiens
Biosample type
7
in vitro differentiated cells
2
primary cell
1
tissue
Organ
4
connective tissue
1
liver
Project
10
AMP
Genome assembly (visualization)
7
hg19
Lab
7
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
audit script error
1
inconsistent ontology term
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
primary cell
pancreatic cell
2
tissue
liver
1
Download