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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
15
total RNA-seq
Assay category
144
DNA binding
15
Transcription
Target of assay
108
histone
108
histone modification
66
broad histone mark
42
narrow histone mark
31
control
5
RNA binding protein
5
transcription factor
Date released
683
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
313
October, 2019
218
June, 2019
205
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
6
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
October, 2022
Available data
159
bam
128
bigWig
113
bed narrowPeak
97
bigBed narrowPeak
39
fastq
15
tsv
Organism
159
Homo sapiens
Biosample type
115
tissue
39
in vitro differentiated cells
5
primary cell
Organ
50
blood vessel
50
vasculature
28
brain
21
heart
13
embryo
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
2
pancreas
Project
159
AMP
Genome assembly (visualization)
128
hg19
127
GRCh38
Lab
159
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
2
inconsistent control read length
audit.ERROR.category!
audit script error
month_released!
October, 2018
BIOSAMPLE
ASSAY
159 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 6 more…
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
primary cell
kidney epithelial cell
5
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