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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
5
Hi-C
3
small RNA-seq
1
RRBS
1
WGBS
Assay category
16
Transcription
5
3D chromatin structure
2
DNA methylation
Date released
461
February, 2021
125
August, 2017
73
October, 2019
50
June, 2019
23
July, 2019
23
October, 2018
14
February, 2023
7
May, 2019
6
November, 2020
5
August, 2021
5
February, 2020
2
April, 2018
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
18
bigWig
17
bam
16
tsv
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
hdf5
Organism
23
Homo sapiens
Biosample type
15
tissue
8
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
23
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
23 results
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total RNA-seq
Hi-C
small RNA-seq
RRBS
WGBS
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
gastrocnemius medialis
4
muscle of leg
1
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
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