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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
50
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
651
February, 2021
382
August, 2017
373
May, 2021
341
May, 2020
334
November, 2017
313
August, 2021
272
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
119
May, 2022
115
May, 2019
95
July, 2019
80
April, 2019
75
December, 2017
74
October, 2018
November, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
2
June, 2018
1
August, 2018
1
December, 2019
1
October, 2022
Available data
283
bam
260
bigWig
189
tsv
50
tagAlign
27
bed narrowPeak
Organism
341
Homo sapiens
Biosample type
193
tissue
147
primary cell
1
cell line
Organ
194
liver
Project
296
AMP
45
T1D
Genome assembly (visualization)
260
hg19
207
GRCh38
Lab
296
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
audit.ERROR.category!
audit script error
month_released!
November, 2018
organ_slims!
epithelium
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
341 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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