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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
Assay category
6
DNA binding
Target of assay
4
transcription factor
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
6
November, 2017
Available data
2755
bam
2528
bigWig
bed narrowPeak
1330
tsv
921
fastq
905
bigBed narrowPeak
298
tagAlign
273
bed broadPeak
236
bed bed3+
236
bigBed broadPeak
161
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
6
cell line
primary cell
Organ
6
liver
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
6
AMP-T2D consortium
Audit category:
2
inconsistent control read length
audit.ERROR.category!
inconsistent control
biosample_type!
primary cell
files.file_type!
bed narrowPeak
month_released!
August, 2022
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
cell line
HepG2
6
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