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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
1
ATAC-seq
Assay category
59
DNA binding
1
DNA accessibility
Target of assay
50
transcription factor
10
RNA binding protein
9
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
26
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
Available data
59
bam
59
fastq
54
bigWig
53
bed narrowPeak
53
bigBed narrowPeak
Organism
60
Homo sapiens
Biosample type
60
cell line
Organ
895
pancreas
764
liver
683
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
158
bone element
141
artery
122
limb
96
musculature of body
61
eye
60
blood
60
bodily fluid
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
60
AMP
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
60
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
inconsistent control
audit.ERROR.category!
inconsistent control
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
ATAC-seq
cell line
GM12878
59
1
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