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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
2
ATAC-seq
2
Hi-C
Assay category
26
DNA binding
2
3D chromatin structure
2
DNA accessibility
Target of assay
24
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
67
December, 2017
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
27
December, 2018
25
February, 2020
23
January, 2019
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2019
1
August, 2022
Available data
27
fastq
26
bam
26
bed narrowPeak
26
bigBed narrowPeak
26
bigWig
1
bedpe
1
hic
Organism
30
Homo sapiens
Biosample type
27
cell line
3
tissue
Organ
26
blood
26
bodily fluid
spleen
3
pancreas
1
liver
Project
30
AMP
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
27
AMP-T2D consortium
2
Bing Ren, UCSD
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
inconsistent control
audit.ERROR.category!
inconsistent control
lab.title!
Mark McCarthy, Oxford
organ_slims!
spleen
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
cell line
GM12878
26
HepG2
1
tissue
islet of Langerhans
2
1
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