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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
15
ChIP-seq
8
ATAC-seq
Assay category
24
DNA accessibility
15
DNA binding
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
67
December, 2017
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
17
fastq
15
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
39
Homo sapiens
Biosample type
31
tissue
8
primary cell
Organ
16
brain
13
pancreas
8
blood
8
bodily fluid
1
adipose tissue
1
connective tissue
1
spleen
Project
23
AMP
16
T1D
Genome assembly (visualization)
14
GRCh38
13
hg19
Lab
22
AMP-T2D consortium
16
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
audit.ERROR.category!
inconsistent control
month_released!
January, 2018
BIOSAMPLE
ASSAY
39 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
tissue
brain
15
islet of Langerhans
4
1
body of pancreas
4
pancreas
4
cerebellum (Hemisphere)
1
+ See 2 more…
primary cell
peripheral blood mononuclear cell
8
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