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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
1
ATAC-seq
1
ChIP-seq
Assay category
19
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
18
June, 2019
2
October, 2019
Available data
19
bam
19
bed narrowPeak
19
bigWig
18
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
18
bigBed narrowPeak
1
tagAlign
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
865
pancreas
777
liver
665
connective tissue
490
adipose tissue
433
epithelium
387
heart
331
kidney
283
brain
235
vasculature
230
blood vessel
141
artery
121
limb
87
musculature of body
75
bone element
61
eye
51
blood
51
bodily fluid
43
nerve
31
embryo
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
20
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
20
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
month_released!
January, 2019
BIOSAMPLE
ASSAY
20 results
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DNase-seq
ATAC-seq
ChIP-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
islet of Langerhans
1
pituitary gland
1
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