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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
4
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
80
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
16
control
6
transcription factor
4
RNA binding protein
2
nucleotide modification
Date released
542
February, 2021
411
August, 2017
406
November, 2017
316
August, 2021
292
May, 2020
291
October, 2019
192
June, 2019
162
July, 2018
158
May, 2021
117
May, 2019
106
July, 2019
95
February, 2023
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
49
April, 2018
43
March, 2020
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
2
June, 2018
1
August, 2022
1
October, 2022
Available data
85
bam
70
bigWig
67
bed narrowPeak
65
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
90
Homo sapiens
Biosample type
84
tissue
6
primary cell
Organ
57
heart
23
kidney
6
connective tissue
4
pancreas
Project
90
AMP
Genome assembly (visualization)
71
hg19
70
GRCh38
Lab
86
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
islet of Langerhans
4
primary cell
osteoblast
4
1
1
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