Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
5
ATAC-seq
5
total RNA-seq
1
pCHi-C
Assay category
32
DNA accessibility
17
Transcription
6
DNA methylation
Date released
269
May, 2021
139
May, 2020
134
May, 2022
127
August, 2017
93
February, 2023
73
September, 2018
59
September, 2020
56
February, 2021
46
August, 2021
43
April, 2018
42
December, 2017
42
July, 2018
39
February, 2018
34
October, 2019
30
June, 2019
29
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
January, 2018
5
March, 2020
5
September, 2017
4
August, 2018
3
March, 2023
3
October, 2022
2
June, 2018
2
May, 2019
2
October, 2018
1
November, 2018
Available data
45
fastq
11
tsv
7
bam
6
bigWig
4
bed bedgraph
1
bed bed3
1
bed bed3+
1
bed narrowPeak
Organism
56
Homo sapiens
Biosample type
tissue
cell line
48
primary cell
8
in vitro differentiated cells
Organ
11
connective tissue
6
epithelium
6
pancreas
Project
45
HPAP
11
AMP
Genome assembly (visualization)
11
hg19
6
GRCh38
Lab
45
Klaus Kaestner, Upenn
11
AMP-T2D consortium
Audit category:
27
audit script error
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
biosample_type!
cell line
tissue
organ_slims!
skin of body
BIOSAMPLE
ASSAY
56 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
total RNA-seq
pCHi-C
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
1
1
in vitro differentiated cells
adipocyte
4
4
Download