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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
Assay category
6
DNA accessibility
Date released
4
February, 2021
2
February, 2023
Available data
2660
bam
2513
bigWig
1371
bed narrowPeak
1370
tsv
920
fastq
663
bigBed narrowPeak
375
tagAlign
264
bed bed3+
bed broadPeak
222
bigBed broadPeak
153
zippedFastqFolder
75
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
17
hic
15
bedpe bed3+
bed bed3
8
csv
6
bed bedgraph
4
hdf5
3
cool
1
bedpe
1
tagAlign bed3+
1
tar
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Organ
4
connective tissue
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
4
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
biosample_type!
cell line
files.file_type!
bed bed3
bed broadPeak
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
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