Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
373
ChIP-seq
Assay category
373
DNA binding
Target of assay
763
histone modification
762
histone
442
transcription factor
388
narrow histone mark
373
broad histone mark
292
control
93
RNA binding protein
82
recombinant protein
25
chromatin remodeller
5
other context
5
other post-translational modification
2
nucleotide modification
Date released
93
August, 2017
56
May, 2019
50
November, 2017
43
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
15
December, 2017
10
May, 2021
10
October, 2017
8
August, 2021
8
February, 2018
4
January, 2019
Available data
303
bigWig
302
bed narrowPeak
272
bam
221
bigBed narrowPeak
96
tagAlign
85
fastq
28
bed broadPeak
11
bed bed3+
8
bigBed broadPeak
Organism
369
Homo sapiens
Biosample type
303
tissue
primary cell
56
in vitro differentiated cells
13
cell line
1
stem cell
Organ
70
brain
57
heart
45
pancreas
41
liver
40
connective tissue
36
blood vessel
36
vasculature
34
limb
20
adipose tissue
16
musculature of body
16
nerve
14
artery
10
kidney
7
epithelium
4
embryo
4
spleen
Project
373
AMP
Genome assembly (visualization)
290
GRCh38
247
hg19
Lab
342
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
10
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
15
inconsistent control read length
1
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
biosample_type!
primary cell
lab.title!
Karen Mohlke, UNC
organ_slims!
blood
BIOSAMPLE
ASSAY
373 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
+ See 26 more…
in vitro differentiated cells
adipocyte
20
embryonic stem cell
11
hepatocyte
7
neural progenitor cell
7
pancreatic endoderm
4
+ See 5 more…
cell line
HepG2
9
Panc1
4
stem cell
hESC
1
See all biosamples
Download