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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
64
histone
64
histone modification
33
narrow histone mark
31
broad histone mark
19
control
3
RNA binding protein
3
transcription factor
Date released
21
October, 2019
21
September, 2018
14
August, 2017
3
August, 2021
2
May, 2019
2
November, 2017
1
June, 2019
Available data
64
bam
61
bigWig
59
bed narrowPeak
37
fastq
15
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
bed bed3+
3
tagAlign
Organism
64
Homo sapiens
Biosample type
64
primary cell
13
in vitro differentiated cells
1
cell line
Organ
64
epithelium
58
pancreas
17
vasculature
16
blood vessel
15
vein
8
kidney
3
brain
3
liver
1
eye
1
musculature of body
0
bodily fluid
Project
64
AMP
Genome assembly (visualization)
61
hg19
59
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
4
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
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