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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
9
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
9
DNA binding
Target of assay
9
control
Date released
54
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
July, 2019
2
May, 2019
Available data
102
bam
85
bigWig
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
67
Homo sapiens
Biosample type
54
cell line
11
tissue
2
primary cell
Organ
665
pancreas
601
connective tissue
478
adipose tissue
350
liver
304
epithelium
200
heart
160
kidney
103
vasculature
101
blood vessel
82
brain
67
artery
67
bone element
35
musculature of body
30
limb
28
eye
20
lung
19
embryo
16
nerve
blood
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
67
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
67
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
blood
bodily fluid
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
5
coronary artery
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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