Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
415
ChIP-seq
183
DNase-seq
Assay category
415
DNA binding
183
DNA accessibility
Target of assay
246
transcription factor
91
histone
91
histone modification
75
control
66
recombinant protein
50
broad histone mark
41
narrow histone mark
39
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
406
November, 2017
322
August, 2017
280
October, 2019
205
May, 2021
200
May, 2022
193
August, 2021
192
June, 2019
184
February, 2023
148
May, 2020
117
May, 2019
90
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
72
February, 2021
59
September, 2020
47
September, 2018
47
September, 2023
41
July, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
20
November, 2019
19
April, 2020
16
January, 2021
15
May, 2023
13
March, 2020
11
September, 2017
8
January, 2018
7
August, 2020
6
November, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
584
bam
522
bigWig
501
bed narrowPeak
500
bigBed narrowPeak
324
fastq
253
bed broadPeak
247
bigBed broadPeak
183
bed bed3+
78
tagAlign
3
tar
Organism
598
Homo sapiens
Biosample type
315
cell line
244
tissue
39
primary cell
Organ
317
liver
121
brain
77
kidney
34
musculature of body
31
limb
30
heart
22
epithelium
18
ureter
12
vasculature
8
blood vessel
7
eye
6
connective tissue
4
pancreas
2
artery
1
adipose tissue
Project
598
AMP
Genome assembly (visualization)
468
GRCh38
446
hg19
Lab
598
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
audit.ERROR.category!
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
598 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
heart
18
muscle of arm
17
caudate nucleus
15
1
substantia nigra
15
+ See 38 more…
primary cell
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
cardiac muscle cell
3
1
choroid plexus epithelial cell
3
1
retinal pigment epithelial cell
3
1
+ See 13 more…
See all biosamples
Download