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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
9
ChIP-seq
7
ATAC-seq
Assay category
190
DNA accessibility
9
DNA binding
Target of assay
4
control
3
histone
3
histone modification
3
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
287
October, 2019
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
49
April, 2018
47
September, 2023
46
March, 2020
40
May, 2024
40
September, 2020
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
195
bigWig
192
bam
188
bed narrowPeak
188
bigBed narrowPeak
183
bed bed3+
183
bed broadPeak
183
bigBed broadPeak
7
fastq
Organism
199
Homo sapiens
Biosample type
162
tissue
37
primary cell
Organ
77
kidney
34
musculature of body
31
limb
30
brain
30
heart
23
epithelium
18
ureter
11
pancreas
7
eye
6
connective tissue
6
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
192
AMP
7
HPAP
Genome assembly (visualization)
195
GRCh38
165
hg19
Lab
192
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
zippedFastqFolder
organ_slims!
ovary
BIOSAMPLE
ASSAY
199 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
brain
12
muscle of leg
12
+ See 34 more…
primary cell
pancreatic alpha cell
5
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
cardiac fibroblast
2
1
skeletal muscle cell
1
2
+ See 15 more…
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