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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
9
ChIP-seq
6
total RNA-seq
Assay category
18
DNA accessibility
9
DNA binding
6
Transcription
Target of assay
4
control
3
histone
3
histone modification
3
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
528
February, 2021
323
November, 2017
275
May, 2020
261
August, 2017
220
October, 2019
204
May, 2021
158
July, 2018
117
May, 2019
90
December, 2017
82
July, 2019
79
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
49
April, 2018
49
August, 2021
39
February, 2018
38
November, 2019
34
December, 2018
30
January, 2019
24
May, 2022
12
October, 2017
11
March, 2020
11
September, 2017
9
June, 2019
5
December, 2019
5
November, 2020
3
August, 2018
2
June, 2018
Available data
226
bed narrowPeak
216
bam
208
bigWig
188
bigBed narrowPeak
184
bed bed3+
bed broadPeak
183
bigBed broadPeak
134
zippedFastqFolder
24
fastq
7
txt
Organism
33
Homo sapiens
Biosample type
24
tissue
9
primary cell
Organ
24
pancreas
3
epithelium
3
eye
2
musculature of body
1
connective tissue
1
heart
Project
33
AMP
Genome assembly (visualization)
23
hg19
5
GRCh38
Lab
24
Kyle Gaulton, UCSD
9
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
33 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
islet of Langerhans
18
6
primary cell
cardiac muscle cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
2
cardiac fibroblast
1
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