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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
Assay category
12
DNA binding
Target of assay
25
histone
25
histone modification
19
transcription factor
13
narrow histone mark
12
broad histone mark
9
control
2
RNA binding protein
Date released
6
August, 2017
5
December, 2017
1
August, 2021
Available data
413
bigWig
406
bed narrowPeak
364
bam
234
bigBed narrowPeak
147
tagAlign
118
fastq
36
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
12
Homo sapiens
Biosample type
6
tissue
4
in vitro differentiated cells
1
primary cell
1
stem cell
Organ
6
pancreas
1
embryo
1
epithelium
1
liver
Project
12
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
12
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed bed3
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
tissue
islet of Langerhans
6
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
hepatocyte
1
stem cell
hESC
1
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