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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
2
Hi-C
Assay category
9
DNA accessibility
2
3D chromatin structure
Date released
5
June, 2019
4
October, 2019
2
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
11
Homo sapiens
Biosample type
6
primary cell
5
tissue
Organ
77
kidney
35
brain
35
limb
33
musculature of body
29
heart
29
pancreas
24
connective tissue
20
epithelium
18
ureter
13
liver
12
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
11
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
month_released!
January, 2019
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
11 results
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DNase-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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