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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
WGBS
12
RRBS
Assay category
26
DNA methylation
Date released
19
July, 2019
7
November, 2018
August, 2017
Available data
2832
bam
2640
bigWig
1555
bed narrowPeak
1352
tsv
1060
fastq
919
bigBed narrowPeak
310
tagAlign
227
bed broadPeak
216
bigBed broadPeak
183
bed bed3+
153
zippedFastqFolder
75
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
16
hic
14
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
26
Homo sapiens
Biosample type
19
tissue
6
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
3
kidney
2
brain
2
liver
musculature of body
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
26
AMP
Genome assembly (visualization)
14
GRCh38
12
hg19
Lab
26
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
month_released!
August, 2017
organ_slims!
musculature of body
ureter
BIOSAMPLE
ASSAY
26 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
body of pancreas
2
heart right ventricle
2
spleen
2
+ See 7 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 1 more…
cell line
HepG2
1
See all biosamples
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