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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ChIP-seq
8
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
125
DNA binding
11
DNA accessibility
Target of assay
125
histone
125
histone modification
75
narrow histone mark
50
broad histone mark
Date released
258
November, 2017
188
June, 2019
136
October, 2019
105
August, 2017
95
May, 2019
90
August, 2021
73
November, 2018
70
December, 2017
April, 2019
64
February, 2023
46
September, 2018
45
October, 2018
43
May, 2021
40
May, 2024
38
May, 2022
30
December, 2018
21
January, 2019
19
November, 2019
18
February, 2021
16
February, 2018
7
July, 2019
6
October, 2017
5
September, 2017
2
March, 2020
2
November, 2020
Available data
229
bam
193
bigWig
176
bed narrowPeak
70
bigBed narrowPeak
tagAlign
11
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
2
hic
1
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
136
Homo sapiens
Biosample type
109
tissue
19
primary cell
8
cell line
Organ
48
limb
42
brain
34
blood vessel
34
vasculature
27
nerve
21
artery
20
epithelium
13
vein
9
kidney
7
pancreas
5
heart
5
liver
Project
136
AMP
Genome assembly (visualization)
136
hg19
135
GRCh38
Lab
136
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
tagAlign
month_released!
April, 2019
BIOSAMPLE
ASSAY
136 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial nerve
24
2
1
tibial artery
18
2
1
brain
5
heart
5
liver
5
+ See 40 more…
primary cell
endothelial cell of umbilical vein
10
2
1
epithelial cell of proximal tubule
6
cell line
Panc1
6
1
glomerular visceral epithelial cell
1
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