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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
25
ChIP-seq
4
DNase-seq
Assay category
49
DNA accessibility
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
21
October, 2019
12
February, 2021
3
May, 2019
2
June, 2019
1
July, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
74
Homo sapiens
Biosample type
62
tissue
12
cell line
Organ
440
liver
200
brain
200
pancreas
187
heart
171
kidney
132
vasculature
129
blood vessel
129
epithelium
91
limb
74
artery
64
connective tissue
54
blood
54
bodily fluid
52
musculature of body
33
eye
27
nerve
18
ureter
14
spleen
13
vein
12
adipose tissue
12
embryo
8
bone element
8
skeleton
1
pituitary gland
Project
74
AMP
Genome assembly (visualization)
74
GRCh38
39
hg19
Lab
74
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
files.file_type!
tagAlign bed3+
organ_slims!
stomach
BIOSAMPLE
ASSAY
74 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
tibial artery
1
18
2
cell line
smooth muscle cell of the coronary artery
8
4
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