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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
14
RRBS
Assay category
31
DNA methylation
Date released
18
July, 2019
7
November, 2018
6
August, 2017
Available data
2941
bam
2750
bigWig
1472
bed narrowPeak
1431
tsv
1347
fastq
808
bigBed narrowPeak
395
tagAlign
153
zippedFastqFolder
135
bed broadPeak
98
bigBed broadPeak
bed bed3+
31
bed bedMethyl
31
bigBed bedMethyl
17
hic
16
bedpe bed3+
14
txt
12
bed bed3
6
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
31
Homo sapiens
Biosample type
24
tissue
6
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
4
musculature of body
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
31
AMP
Genome assembly (visualization)
17
GRCh38
14
hg19
Lab
31
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed bed3+
month_released!
June, 2019
organ_slims!
kidney
BIOSAMPLE
ASSAY
31 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
+ See 1 more…
cell line
HepG2
1
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