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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
DNase-seq
Assay category
8
DNA accessibility
Date released
5
June, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
568
bam
548
bigWig
477
tsv
89
fastq
52
bed narrowPeak
24
bed bed3+
18
bigBed narrowPeak
10
tagAlign
9
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
8
Homo sapiens
Biosample type
5
primary cell
2
tissue
1
in vitro differentiated cells
Organ
77
kidney
55
liver
38
brain
35
limb
32
musculature of body
29
heart
19
epithelium
18
ureter
14
vasculature
11
blood vessel
8
connective tissue
7
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
7
hg19
Lab
8
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
8 results
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DNase-seq
primary cell
cardiac fibroblast
2
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
in vitro differentiated cells
adipocyte
1
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