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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
27
DNase-seq
Assay category
58
DNA binding
27
DNA accessibility
Target of assay
52
histone
52
histone modification
34
broad histone mark
18
narrow histone mark
6
transcription factor
4
RNA binding protein
Date released
46
April, 2019
27
June, 2019
12
May, 2019
Available data
156
bigWig
134
bed narrowPeak
130
bam
113
tsv
85
bigBed narrowPeak
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
bedpe bed3+
3
hic
0
ibed
Organism
85
Homo sapiens
Biosample type
83
tissue
2
primary cell
Organ
358
liver
127
brain
99
kidney
91
pancreas
90
heart
83
limb
82
vasculature
79
blood vessel
71
epithelium
54
blood
54
bodily fluid
39
musculature of body
26
nerve
artery
18
connective tissue
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
85
AMP
Genome assembly (visualization)
85
GRCh38
82
hg19
Lab
85
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
artery
BIOSAMPLE
ASSAY
85 results
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ChIP-seq
DNase-seq
tissue
heart left ventricle
28
3
heart
7
18
heart right ventricle
11
1
right atrium auricular region
7
2
right cardiac atrium
5
+ See 1 more…
primary cell
cardiac fibroblast
2
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