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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
22
ATAC-seq
16
DNase-seq
1
FAIRE-seq
Assay category
39
DNA accessibility
32
DNA binding
Target of assay
27
histone
27
histone modification
14
broad histone mark
13
narrow histone mark
5
RNA binding protein
5
transcription factor
1
chromatin remodeller
Date released
15
June, 2019
14
December, 2017
14
October, 2019
14
September, 2018
5
September, 2017
4
November, 2017
3
August, 2017
2
May, 2019
Available data
253
bam
252
fastq
243
bigWig
129
bed narrowPeak
119
tsv
80
zippedFastqFolder
71
bigBed narrowPeak
21
bed broadPeak
21
bigBed broadPeak
20
bed bed3+
7
tagAlign
5
bed bedMethyl
5
bigBed bedMethyl
5
hic
4
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
71
Homo sapiens
Biosample type
56
primary cell
14
in vitro differentiated cells
1
cell line
Organ
358
liver
127
brain
99
kidney
91
pancreas
heart
83
limb
82
vasculature
79
blood vessel
71
epithelium
54
blood
54
bodily fluid
39
musculature of body
26
nerve
25
artery
18
connective tissue
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
71
AMP
Genome assembly (visualization)
70
GRCh38
65
hg19
Lab
71
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
adrenal gland
heart
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 11 more…
in vitro differentiated cells
hepatocyte
14
cell line
glomerular visceral epithelial cell
1
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