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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
1
ChIP-seq
Assay category
3
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
3
July, 2019
1
November, 2017
Available data
bam
220
bigWig
201
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
25
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Organ
41
heart
35
liver
20
pancreas
14
musculature of body
12
epithelium
8
connective tissue
4
brain
3
adipose tissue
2
blood vessel
2
vasculature
1
blood
1
bodily fluid
1
embryo
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bam
month_released!
October, 2022
BIOSAMPLE
ASSAY
4 results
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Hi-C
ChIP-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
tissue
cingulate gyrus
1
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