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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
July, 2019
1
October, 2019
Available data
2208
bam
2083
bigWig
1377
bed narrowPeak
973
tsv
922
fastq
688
bigBed narrowPeak
295
tagAlign
243
bed bed3+
239
bed broadPeak
209
bigBed broadPeak
153
zippedFastqFolder
76
txt
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
17
hic
15
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
3
cool
2
bed bedgraph
1
bedpe
1
tagAlign bed3+
1
tar
1
vcf
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
connective tissue
1
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
lab.title!
ITG
month_released!
November, 2017
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
4 results
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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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