Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
4
ATAC-seq
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
401
Transcription
6
DNA accessibility
Date released
386
February, 2021
August, 2017
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
October, 2017
1
October, 2019
Available data
403
bigWig
401
bam
401
tsv
4
bed narrowPeak
3
bigBed narrowPeak
3
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
Organism
409
Homo sapiens
Biosample type
407
tissue
2
primary cell
1
in vitro differentiated cells
Organ
736
liver
585
pancreas
517
connective tissue
410
adipose tissue
402
epithelium
387
heart
331
kidney
283
brain
235
vasculature
230
blood vessel
141
artery
121
limb
75
bone element
69
blood
69
bodily fluid
61
eye
61
musculature of body
43
nerve
31
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
410
AMP
Genome assembly (visualization)
405
hg19
402
GRCh38
Lab
410
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
month_released!
August, 2017
November, 2019
October, 2018
BIOSAMPLE
ASSAY
410 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
small RNA-seq
DNase-seq
pCHi-C
RNA microarray
tissue
adipose tissue
382
3
1
omental fat pad
5
1
1
2
subcutaneous adipose tissue
7
1
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
in vitro differentiated cells
white fat cell
1
Download