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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
185
ChIP-seq
Assay category
185
DNA binding
Target of assay
185
histone
185
histone modification
115
narrow histone mark
70
broad histone mark
31
control
3
RNA binding protein
3
transcription factor
Date released
75
October, 2019
73
November, 2017
25
May, 2019
12
October, 2017
Available data
165
bed narrowPeak
164
bam
164
bigWig
99
tagAlign
91
bigBed narrowPeak
12
bed broadPeak
10
fastq
3
bigBed broadPeak
1
tagAlign bed3+
Organism
185
Homo sapiens
Biosample type
182
tissue
3
primary cell
Organ
185
brain
139
pancreas
103
liver
95
heart
77
epithelium
71
vasculature
70
blood vessel
70
connective tissue
49
limb
32
adipose tissue
28
kidney
26
musculature of body
24
nerve
20
artery
15
vein
10
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
185
AMP
Genome assembly (visualization)
166
GRCh38
115
hg19
Lab
185
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
month_released!
February, 2020
organ_slims!
esophagus
BIOSAMPLE
ASSAY
185 results
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ChIP-seq
tissue
layer of hippocampus
20
brain
17
angular gyrus
14
substantia nigra
14
caudate nucleus
13
+ See 61 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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