Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
13
total RNA-seq
1
GRO-seq
Assay category
18
DNA binding
13
Transcription
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
4
broad histone mark
3
transcription factor
Date released
October, 2019
13
February, 2018
9
December, 2017
8
August, 2021
1
February, 2020
1
January, 2018
Available data
30
bam
25
bigWig
23
fastq
13
tsv
12
bed narrowPeak
3
bed bed3+
Organism
32
Homo sapiens
Biosample type
23
in vitro differentiated cells
8
cell line
1
tissue
Organ
847
pancreas
784
liver
661
connective tissue
489
adipose tissue
399
epithelium
379
heart
314
kidney
199
brain
188
vasculature
183
blood vessel
115
artery
87
musculature of body
75
bone element
69
blood
69
bodily fluid
52
limb
40
eye
31
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
vein
Project
32
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
1
hg18
Lab
32
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
32 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
4
1
cell line
H1-hESC
8
tissue
tibial nerve
1
Download