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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
56
histone
56
histone modification
42
control
42
transcription factor
41
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
139
October, 2019
88
August, 2017
63
May, 2021
38
November, 2017
33
May, 2019
27
May, 2020
23
April, 2019
15
May, 2024
15
September, 2018
14
December, 2017
11
August, 2021
11
October, 2018
8
February, 2018
3
January, 2019
3
June, 2019
2
March, 2020
2
October, 2017
Available data
41
bam
40
bed narrowPeak
40
bigWig
27
tagAlign
14
fastq
7
bigBed narrowPeak
5
bed bed3+
Organism
41
Homo sapiens
Biosample type
29
tissue
11
in vitro differentiated cells
1
stem cell
Organ
34
liver
5
epithelium
3
embryo
Project
41
AMP
Genome assembly (visualization)
40
hg19
32
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
tissue
liver
27
right lobe of liver
2
in vitro differentiated cells
hepatocyte
5
pancreatic endoderm
3
Posterior foregut
1
definitive endodermal cell
1
primitive gut cell
1
stem cell
hESC
1
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