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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
3
small RNA-seq
1
ATAC-seq
1
Hi-C
Assay category
16
Transcription
1
3D chromatin structure
1
DNA accessibility
Date released
455
February, 2021
125
August, 2017
23
October, 2018
17
July, 2019
10
February, 2023
6
June, 2019
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
May, 2021
1
August, 2018
1
January, 2018
1
March, 2020
1
May, 2023
1
November, 2018
1
October, 2017
Available data
18
bigWig
17
bam
16
tsv
1
bed bed3+
1
bed narrowPeak
1
fastq
1
hdf5
Organism
18
Homo sapiens
Biosample type
11
tissue
7
primary cell
Organ
34
brain
24
heart
18
connective tissue
13
adipose tissue
12
epithelium
12
vasculature
11
blood vessel
11
pancreas
10
kidney
10
liver
10
musculature of body
5
limb
3
artery
2
pericardium
1
eye
spleen
Project
18
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
18 results
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total RNA-seq
small RNA-seq
ATAC-seq
Hi-C
tissue
omental fat pad
4
1
1
subcutaneous adipose tissue
4
1
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
mesangial cell
1
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