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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
DNase-seq
6
ChIP-seq
2
total RNA-seq
1
Hi-C
Assay category
29
DNA accessibility
6
DNA binding
2
Transcription
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
3
broad histone mark
2
narrow histone mark
1
control
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
30
June, 2019
24
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
37
bam
36
bigWig
34
bed narrowPeak
29
bed bed3+
29
bed broadPeak
29
bigBed broadPeak
29
bigBed narrowPeak
2
tsv
1
bedpe bed3+
1
hic
Organism
38
Homo sapiens
Biosample type
35
tissue
3
primary cell
Organ
114
brain
100
limb
94
kidney
53
vasculature
52
blood vessel
50
epithelium
42
nerve
38
heart
34
musculature of body
28
artery
28
eye
22
pancreas
21
vein
ureter
10
connective tissue
8
liver
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
38
AMP
Genome assembly (visualization)
36
GRCh38
34
hg19
Lab
38
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
ureter
BIOSAMPLE
ASSAY
38 results
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DNase-seq
ChIP-seq
total RNA-seq
Hi-C
tissue
heart
18
5
2
1
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
heart right ventricle
1
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primary cell
cardiac fibroblast
2
1
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