Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
5
DNase-seq
3
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
24
DNA binding
7
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
392
February, 2021
86
August, 2017
80
May, 2022
61
September, 2018
53
February, 2023
35
October, 2019
33
April, 2018
32
July, 2018
25
October, 2018
24
July, 2019
19
September, 2020
17
June, 2019
15
December, 2017
7
August, 2020
6
December, 2019
6
November, 2017
5
August, 2021
5
September, 2017
4
August, 2018
4
May, 2021
3
October, 2022
2
February, 2020
2
March, 2020
2
May, 2019
1
January, 2018
1
June, 2018
1
May, 2023
1
November, 2018
1
October, 2017
Available data
31
bam
26
bigWig
20
bed narrowPeak
15
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
tsv
2
bed bed3+
1
hic
1
tar
Organism
35
Homo sapiens
Biosample type
32
primary cell
2
cell line
1
tissue
Organ
84
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
34
epithelium
26
artery
21
eye
21
vein
18
pancreas
17
kidney
8
heart
6
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
35
AMP
Genome assembly (visualization)
27
hg19
22
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
1
audit script error
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
ureter
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
cell line
glomerular visceral epithelial cell
1
1
tissue
adipose tissue
1
Download