Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
12
total RNA-seq
1
GRO-seq
1
pCHi-C
Assay category
14
DNA binding
12
Transcription
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
broad histone mark
3
transcription factor
Date released
10
February, 2018
8
August, 2021
8
December, 2017
1
January, 2018
1
March, 2020
Available data
26
bam
21
bigWig
19
fastq
13
tsv
8
bed narrowPeak
2
bed bed3+
Organism
28
Homo sapiens
Biosample type
19
in vitro differentiated cells
9
cell line
Organ
793
pancreas
748
liver
625
connective tissue
470
adipose tissue
395
epithelium
330
heart
316
kidney
213
brain
190
vasculature
185
blood vessel
127
artery
87
limb
75
bone element
71
musculature of body
69
blood
69
bodily fluid
eye
27
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
28
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
1
hg18
Lab
28
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
organ_slims!
eye
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
pCHi-C
in vitro differentiated cells
pancreatic endoderm
14
4
1
cell line
H1-hESC
8
MCF-7
1
Download