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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
ChIP-seq
5
total RNA-seq
Assay category
145
DNA binding
5
Transcription
Target of assay
99
histone
99
histone modification
62
broad histone mark
37
narrow histone mark
27
control
19
transcription factor
11
RNA binding protein
6
chromatin remodeller
Date released
714
February, 2021
410
August, 2017
402
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
84
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
150
bam
123
bigWig
118
bed narrowPeak
118
bigBed narrowPeak
30
fastq
5
tsv
Organism
150
Homo sapiens
Biosample type
122
tissue
23
cell line
5
primary cell
Organ
50
blood vessel
50
vasculature
28
brain
21
heart
18
blood
18
bodily fluid
7
limb
7
musculature of body
7
spleen
5
artery
5
epithelium
5
kidney
5
liver
2
pancreas
Project
150
AMP
Genome assembly (visualization)
123
hg19
122
GRCh38
Lab
150
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
audit.ERROR.category!
inconsistent replicate
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
150 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 7 more…
cell line
GM12878
18
HepG2
5
primary cell
kidney epithelial cell
5
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