Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
RRBS
6
ATAC-seq
1
WGBS
Assay category
11
DNA methylation
6
DNA accessibility
Date released
9
July, 2019
5
February, 2023
1
August, 2017
1
February, 2021
1
November, 2018
Available data
1484
bam
1397
bigWig
981
fastq
832
bed narrowPeak
524
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bedgraph
6
bed bed3
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
1
vcf
Organism
17
Homo sapiens
Biosample type
tissue
11
primary cell
5
in vitro differentiated cells
1
cell line
Organ
7
connective tissue
6
epithelium
3
kidney
2
liver
1
brain
1
eye
1
heart
1
musculature of body
1
vasculature
Project
17
AMP
Genome assembly (visualization)
16
hg19
2
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
inconsistent replicate
audit.ERROR.category!
inconsistent replicate
biosample_type!
tissue
organ_slims!
esophagus
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
RRBS
ATAC-seq
WGBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 6 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
See all biosamples
Download