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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
total RNA-seq
14
small RNA-seq
12
WGBS
7
ChIP-seq
6
ATAC-seq
4
Hi-C
4
RRBS
2
FAIRE-seq
Assay category
43
Transcription
16
DNA methylation
8
DNA accessibility
7
DNA binding
4
3D chromatin structure
Target of assay
4
control
3
transcription factor
Date released
545
February, 2021
239
October, 2019
227
August, 2021
193
May, 2020
159
June, 2019
137
August, 2017
113
May, 2019
82
November, 2017
80
April, 2019
77
February, 2023
71
July, 2019
48
December, 2017
47
September, 2023
42
May, 2022
40
May, 2024
31
March, 2020
24
February, 2020
23
October, 2018
19
April, 2020
19
November, 2018
18
October, 2017
15
May, 2023
7
December, 2018
7
January, 2019
3
December, 2019
3
May, 2021
2
January, 2018
1
November, 2019
Available data
67
bam
62
bigWig
43
tsv
12
bed bedMethyl
12
bigBed bedMethyl
10
bed narrowPeak
7
fastq
5
bigBed narrowPeak
Organism
78
Homo sapiens
Biosample type
78
tissue
31
primary cell
28
cell line
Organ
20
heart
11
brain
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
spleen
7
vasculature
pancreas
5
limb
4
kidney
1
artery
1
pericardium
Project
78
AMP
Genome assembly (visualization)
60
GRCh38
57
hg19
Lab
78
AMP-T2D consortium
audit.ERROR.category!
inconsistent replicate
organ_slims!
pancreas
BIOSAMPLE
ASSAY
78 results
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total RNA-seq
small RNA-seq
WGBS
ChIP-seq
ATAC-seq
Hi-C
RRBS
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
spleen
7
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
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