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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
4
ATAC-seq
1
Hi-C
1
pCHi-C
Assay category
39
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
39
bam
38
bigWig
38
tsv
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
45
Homo sapiens
Biosample type
206
primary cell
132
in vitro differentiated cells
45
tissue
21
cell line
Organ
42
pancreas
2
heart
1
thymus
Project
44
AMP
1
T1D
Genome assembly (visualization)
41
hg19
40
GRCh38
Lab
38
AMP-T2D consortium
2
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
45 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
36
4
1
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
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