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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
8
snATAC-seq
Assay category
78
DNA binding
8
DNA accessibility
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
682
February, 2021
368
November, 2017
314
May, 2020
304
August, 2021
276
May, 2021
203
June, 2019
169
August, 2017
158
October, 2019
149
February, 2023
102
July, 2019
96
May, 2022
85
May, 2019
81
November, 2018
78
December, 2017
57
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
35
December, 2018
31
February, 2018
27
January, 2019
25
May, 2024
24
February, 2020
23
October, 2018
19
April, 2020
16
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
78
bam
78
fastq
57
bed narrowPeak
57
bigWig
43
bigBed narrowPeak
10
bed bed3+
Organism
86
Homo sapiens
Biosample type
46
tissue
30
in vitro differentiated cells
8
primary cell
2
stem cell
Organ
56
liver
12
epithelium
8
blood
8
bodily fluid
8
embryo
pancreas
Project
78
AMP
8
T1D
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
78
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
9
inconsistent control read length
audit.ERROR.category!
inconsistent replicate
organ_slims!
pancreas
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
snATAC-seq
tissue
liver
38
right lobe of liver
8
in vitro differentiated cells
hepatocyte
10
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
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primary cell
peripheral blood mononuclear cell
8
stem cell
hESC
2
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