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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
DNase-seq
2
ChIP-seq
Assay category
78
DNA accessibility
2
DNA binding
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
narrow histone mark
1
transcription factor
Date released
130
August, 2021
80
June, 2019
47
September, 2023
25
October, 2019
15
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
4
May, 2019
3
December, 2019
2
March, 2020
Available data
80
bam
79
bed narrowPeak
79
bigBed narrowPeak
79
bigWig
78
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
Organism
80
Homo sapiens
Biosample type
68
tissue
12
primary cell
Organ
80
kidney
39
musculature of body
33
heart
32
limb
30
brain
18
epithelium
18
ureter
14
connective tissue
7
vasculature
6
eye
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
80
AMP
Genome assembly (visualization)
79
GRCh38
72
hg19
Lab
80
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
audit.ERROR.category!
inconsistent replicate
organ_slims!
bone element
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
80 results
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DNase-seq
ChIP-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
epithelial cell of proximal tubule
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
glomerular endothelial cell
1
kidney capillary endothelial cell
1
+ See 3 more…
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