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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
28
snATAC-seq
5
single cell RNA-seq
Assay category
28
DNA accessibility
28
DNA binding
5
Transcription
Target of assay
28
transcription factor
3
chromatin remodeller
Date released
32
February, 2021
27
December, 2017
1
December, 2018
1
May, 2022
Available data
55
fastq
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
9
tsv
6
txt
5
csv
4
hic
3
bedpe bed3+
3
cool
1
bed bed3+
Organism
61
Homo sapiens
Biosample type
33
tissue
27
primary cell
1
cell line
Organ
27
liver
5
kidney
1
blood
1
bodily fluid
1
musculature of body
Project
34
AMP
27
HPAP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
34
AMP-T2D consortium
27
Klaus Kaestner, Upenn
Audit category:
95
inconsistent ontology term
33
audit script error
28
inconsistent control
month_released!
February, 2023
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
snATAC-seq
single cell RNA-seq
tissue
liver
27
kidney
5
skeletal muscle tissue
1
primary cell
Langerhans cell
27
cell line
GM12878
1
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