Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
snATAC-seq
5
single cell RNA-seq
3
Hi-C
2
RNA microarray
Assay category
29
DNA accessibility
5
Transcription
3
3D chromatin structure
Date released
32
February, 2021
3
October, 2022
2
December, 2019
1
August, 2022
1
May, 2022
October, 2019
Available data
27
fastq
7
tsv
6
txt
5
csv
3
bedpe bed3+
3
cool
3
hic
1
bed bed3+
Organism
39
Homo sapiens
Biosample type
30
primary cell
9
tissue
in vitro differentiated cells
Organ
7
kidney
4
epithelium
4
pancreas
1
musculature of body
Project
30
HPAP
9
AMP
Genome assembly (visualization)
4
hg19
Lab
30
Klaus Kaestner, Upenn
9
AMP-T2D consortium
Audit category:
220
inconsistent ontology term
39
audit script error
28
inconsistent control
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
month_released!
June, 2018
October, 2019
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
single cell RNA-seq
Hi-C
RNA microarray
primary cell
Langerhans cell
27
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
kidney
5
islet of Langerhans
1
kidney interstitium
1
renal glomerulus
1
skeletal muscle tissue
1
Download