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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
2
RNA microarray
2
single cell RNA-seq
Assay category
3
3D chromatin structure
2
Transcription
Date released
4
December, 2019
3
October, 2022
Available data
27
fastq
9
tsv
txt
5
csv
4
hic
3
bedpe bed3+
3
cool
1
bed bed3+
Organism
7
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
2
tissue
Organ
4
epithelium
3
pancreas
2
kidney
Project
4
AMP
3
HPAP
Genome assembly (visualization)
3
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
150
inconsistent ontology term
7
audit script error
files.file_type!
bed broadPeak
txt
BIOSAMPLE
ASSAY
7 results
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Hi-C
RNA microarray
single cell RNA-seq
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
tissue
kidney interstitium
1
renal glomerulus
1
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